[FCA] Haltere (10x, Stringent)

Summary

Visualization

Analysis

2runs

Data

1LOOM files

Settings

Public project Shared with 0 users

Identity

v9ylud

Project Name

[FCA] Haltere (10x, Stringent)

TypeUnknown

Origin

New project

Activity

CreatedJun 11, 2021

UpdatedNov 18, 2025

Reproducibility

Instructions List of commands

List of Loom files (JSON)

Source repository links

ArrayExpress Experiment

Identifier	Title	Other identifiers	Contributors
E-MTAB-10519	The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset		Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein

Downloaded from Fly Cell Atlas

Publications

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly

H Li et al.

Details

LOOM file	Run	Embedding	Created by	Created
Parsing	Parsing #1	Embedding_HVG_PC1_PC2	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_t_SNE	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_t_SNE	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_UMAP	bbcf.epfl	Jun 11, 2021

Metadata

Cluster/category	Label	Up-regulated genes	Down-regulated genes	Votes	Created by	Created
5	muscle cell	Mhc	-	+2 / -0	bbcf.epfl	May 30, 2022
3	hemocyte	Sh para Ppn pnr grh Hml	-	+2 / -0	bbcf.epfl	May 30, 2022
2	epithelial cell	pnr grh Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
1	adult glial cell	-	-	+0 / -0	bbcf.epfl	May 30, 2022
0	adult fat body	path apolpp FASN1	-	+1 / -0	bbcf.epfl	May 30, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	-	-	+0 / -0	bbcf.epfl	May 26, 2022
6	neuron of haltere	-	-	+0 / -0	bbcf.epfl	May 26, 2022
4	mechanosensory neuron of haltere	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron of haltere	neuron of haltere	-	-	+0 / -0	bbcf.epfl	May 26, 2022
mechanosensory neuron of haltere	mechanosensory neuron of haltere	-	-	+0 / -0	bbcf.epfl	May 26, 2022
artefact	artefact	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult glial cell	adult glial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00046052	FBbt:00046052	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005144	FBbt:00005144	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005124	FBbt:00005124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	-	-	+0 / -0	bbcf.epfl	May 26, 2022
tracheolar cell	tracheolar cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
somatic precursor cell	somatic precursor cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
sensory neuron	sensory neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
oenocyte	oenocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male reproductive system	male reproductive system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male germline cell	male germline cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
glial cell	glial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
gland	gland	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female reproductive system	female reproductive system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female germline cell	female germline cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
fat cell	fat cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
epithelial cell	epithelial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00046052	FBbt:00046052	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005144	FBbt:00005144	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005124	FBbt:00005124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00100497	FBbt:00100497	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005063	FBbt:00005063	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003209	FBbt:00003209	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00000124	FBbt:00000124	-	-	+0 / -0	bbcf.epfl	May 26, 2022

Go back to project's annotations

Includes annotations from every project you can read that shares this cell set.

Source project	Metadata name	Cluster/category	Label	Cell set	Up-regulated genes	Down-regulated genes	Votes	Created by	Created

[FCA] Haltere (10x, Stringent) ASAP48 v5

Summary

ArrayExpress Experiment

LOOM/H5AD

Details