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Releases
Release notes & changelog
Project types
Available project types and their configurations
Cell ontologies
Ontology catalogs mirrored from legacy ASAP
Cell metadata schema
Cell metadata used by ASAP to annotate single-cell datasets
Cross-references
Identifier types and external database links
Atlases
FCA and HCA reference pages and entry points
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Supported upload and export formats
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OpenAPI/Swagger reference for JSON endpoints
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Frequently asked questions about ASAP
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Identity
[FCA] Heart (10x, Stringent)
Activity
Reproducibility
Source repository links
| Identifier | Title | Other identifiers | Contributors |
|---|---|---|---|
| E-MTAB-10519 | The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset |
|
Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein
|
Downloaded from Fly Cell Atlas
Publications
| LOOM file | Run | Embedding | Created by | Created |
|---|---|---|---|---|
| Parsing | Parsing #1 | Embedding_HVG_PC1_PC2 | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_HVG_t_SNE | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_HVG_UMAP | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_SCENIC_AUC_t_SNE | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_SCENIC_AUC_UMAP | bbcf.epfl | Jun 11, 2021 |
No checkpoints.
No comments.
| Cluster/category | Label | Origin | Cell set | Up-regulated genes | Down-regulated genes | Votes | Created by | Created |
|---|---|---|---|---|---|---|---|---|
| 14 | muscle cell | SCope manual |
Mlp84B
Act57B
fln
bt
wupA
org-1
TpnC4
sls
|
- | +3 / -0 | bbcf.epfl | May 30, 2022 | |
| 13 | indirect flight muscle | SCope manual |
Mlp84B
Act57B
fln
bt
wupA
org-1
TpnC4
sls
|
- | +3 / -0 | bbcf.epfl | May 30, 2022 | |
| 12 | hemocyte | SCope manual |
sns
Amnionless
Muc11A
zfh1
mesh
Ppn
Scp2
grh
Hml
Hand
|
- | +3 / -0 | bbcf.epfl | May 30, 2022 | |
| 11 | epithelial cell | SCope manual |
Ppn
grh
Hml
|
- | +3 / -0 | bbcf.epfl | May 30, 2022 | |
| 10 | crystal cell | SCope manual |
lz
Ppn
Hml
PPO1
PPO2
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 7 | adult salivary gland | SCope manual | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 4 | adult oenocyte | SCope manual | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 3 | adult heart ventral longitudinal muscle | SCope manual |
Mlp84B
Act57B
lz
Ppn
fln
bt
wupA
grh
Hml
PPO1
org-1
trh
TpnC4
PPO2
sls
|
- | +3 / -0 | bbcf.epfl | May 30, 2022 | |
| 2 | adult fat body | SCope manual | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 1 | adult abdominal pericardial cell | SCope manual | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 0 | adult Malpighian tubule | SCope manual | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 96 | Elk-positive adult cardiomyocytes | SCope manual |
H15
Oct-TyrR
Elk
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 88 | Tdc1-expressing unknown muscle | SCope manual |
Tdc1
bt
sls
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 82 | ostium | SCope manual |
H15
wg
Doc3
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 39 | FGF-positive adult cardiomyocyte | SCope manual |
H15
pyr
ths
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 37 | embryonic/larval fat body | SCope manual |
Lsp1alpha
Lsp1beta
Fbp1
Fbp2
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 5 | adult ostium | SCope manual |
Doc1
wg
Doc3
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 34 | sens-2 Rh50 expressing unknown cluster | SCope manual |
sens-2
lab
Rh50
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 33 | unknown muscle (Alary?) | SCope manual |
tn
Pkcdelta
bt
Zasp66
sls
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 32 | adult salivary gland | SCope manual |
CG12310
Sox21b
CG4839
fkh
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 30 | unknown cluster of Toll-4 positive cells | SCope manual |
CG15550
Toll-4
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 28 | Mlp84B expressing unknown muscle cluster | SCope manual |
Mlp84B
sls
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 26 | other immune cells | SCope manual |
AttA
AttC
DptB
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 25 | jbug Ppn double-positive unknown cluster | SCope manual |
Ppn
jbug
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 24 | adult pericardial cell | SCope manual |
sns
pros
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 23 | trachea | SCope manual |
wat
trh
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 22 | crystal cell | SCope manual |
lz
PPO1
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 19 | adult fat body | SCope manual |
FASN3
FASN2
LpR1
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 18 | Salm-positive fatbody | SCope manual |
FASN3
FASN2
salm
LpR1
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 17 | Lsd-1 Prat2 expressing adult fat body | SCope manual |
Prat2
Lsd-1
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 16 | Lsd-1 Prat2 expressing adult fat body | SCope manual |
Prat2
Lsd-1
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 15 | adult fat body | SCope manual |
FASN2
LpR1
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 14 | male specific cluster of unknown identity | SCope manual |
Got1
GlyS
Gnmt
TotA
MtnE
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 13 | adult neuron | SCope manual |
Syt1
para
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 12 | hemocyte | SCope manual |
ct
Ppn
Hml
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 11 | Lsd-1 Prat2 expressing adult fat body | SCope manual |
Prat2
Lsd-1
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 10 | other immune cells | SCope manual |
AttA
AttC
DptB
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 9 | adult fat body | SCope manual |
FASN2
LpR1
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 8 | adult fat body | SCope manual |
FASN2
LpR1
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 6 | ventral layer muscle syncytium | SCope manual |
org-1
sls
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 5 | adult pericardial cell | SCope manual |
sns
pros
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 4 | adult fat body | SCope manual |
FASN2
LpR1
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 2 | hemocyte | SCope manual |
ct
Ppn
Hml
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 1 | Lsd-1 Prat2 expressing adult fat body | SCope manual |
Prat2
Lsd-1
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 0 | adult fat body | SCope manual |
FASN2
LpR1
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 27 | FGF-positive cardiomyocytes | SCope manual |
H15
pyr
ths
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 36 | indirect flight muscle | SCope manual |
vg
fln
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 12 | crystal cell | SCope manual |
lz
PPO1
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 10 | sensory neuron | SCope manual |
sv
Vmat
Sox15
pdm3
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 1 | trh-negative tracheal cells | SCope manual |
wat
form3
btsz
dpy
Fas2
ed
|
- | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 9 | cardiomyocyte, working adult heart muscle (non-ostia) | SCope manual |
tin
lbl
|
- | +1 / -0 | bbcf.epfl | May 26, 2022 | |
| 8 | adult tracheal cell | SCope manual |
trh
|
- | +1 / -0 | bbcf.epfl | May 26, 2022 | |
| 6 | adult peripheral neuron of the heart | SCope manual |
nSyb
Syt1
|
- | +2 / -0 | bbcf.epfl | May 26, 2022 |
No annotations for this metadata.
Includes annotations from every project you can read that shares this cell set.
| Source project | Metadata name | Cluster/category | Label | Origin | Cell set | Up-regulated genes | Down-regulated genes | Votes | Created by | Created |
|---|
No annotations found for this cell set.