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Cell ontologies
Ontology catalogs mirrored from legacy ASAP
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Cell metadata used by ASAP to annotate single-cell datasets
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Identity
[FCA] Male reproductive glands (10x, Stringent)
Activity
Reproducibility
Source repository links
| Identifier | Title | Other identifiers | Contributors |
|---|---|---|---|
| E-MTAB-10519 | The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset |
|
Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein
|
Downloaded from Fly Cell Atlas
Publications
| LOOM file | Run | Embedding | Created by | Created |
|---|---|---|---|---|
| Parsing | Parsing #1 | Embedding_HVG_PC1_PC2 | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_HVG_t_SNE | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_HVG_UMAP | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_SCENIC_AUC_t_SNE | bbcf.epfl | Jun 11, 2021 |
| Parsing | Parsing #1 | Embedding_SCENIC_AUC_UMAP | bbcf.epfl | Jun 11, 2021 |
No checkpoints.
No comments.
| Cluster/category | Label | Origin | Cell set | Up-regulated genes | Down-regulated genes | Votes | Created by | Created |
|---|---|---|---|---|---|---|---|---|
| 12 | spermatid | SCope manual | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 11 | seminal vesicle | SCope manual | - | - | +2 / -0 | bbcf.epfl | May 30, 2022 | |
| 9 | muscle cell | SCope manual |
Mhc
|
- | +2 / -0 | bbcf.epfl | May 30, 2022 | |
| 7 | male accessory gland secondary cell | SCope manual | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 6 | male accessory gland main cell | SCope manual | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 5 | hemocyte | SCope manual |
NimC1
pnr
Hml
|
- | +2 / -0 | bbcf.epfl | May 30, 2022 | |
| 4 | epithelial cell | SCope manual | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 3 | ejaculatory bulb epithelium | SCope manual | - | - | +1 / -0 | bbcf.epfl | May 30, 2022 | |
| 2 | ejaculatory bulb | SCope manual | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 1 | anterior ejaculatory duct | SCope manual | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 0 | adult fat body | SCope manual | - | - | +0 / -0 | bbcf.epfl | May 30, 2022 | |
| 10 | secretory cell of the male reproductive tract | SCope manual | - | - | +0 / -0 | bbcf.epfl | May 26, 2022 | |
| 8 | male reproductive tract muscle | SCope manual |
Mhc
fru
trol
Zasp66
|
- | +3 / -0 | bbcf.epfl | May 26, 2022 |
No annotations for this metadata.
Includes annotations from every project you can read that shares this cell set.
| Source project | Metadata name | Cluster/category | Label | Origin | Cell set | Up-regulated genes | Down-regulated genes | Votes | Created by | Created |
|---|
No annotations found for this cell set.