[FCA] Antenna (10x, Relaxed) ASAP26 v5

41,298 cells D. melanogaster

Parsing

Success
2021-06-11 14:21 Wait 0:13 Run 0:59 (expected 1:17) Max. RAM 2.19TB (expected 2.75GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
/col_attrs/dissection_lab 1 cell 1 category /col_attrs/annotation_broad__ontology_id 1 cell 7 categories /col_attrs/Embedding_HVG_UMAP 41298 cells 2 rows /col_attrs/scrublet__predicted_doublets_based_on_10x_chromium_spec 1 cell 1 category /col_attrs/age 1 cell 1 category /col_attrs/annotation_broad 1 cell 7 categories /col_attrs/fca_id 1 cell 5 categories /col_attrs/n_counts 41298 cells 1 row /col_attrs/Embedding_HVG_t_SNE 41298 cells 2 rows /col_attrs/Embedding_HVG_PC1_PC2 41298 cells 2 rows /col_attrs/percent_mito 41298 cells 1 row /col_attrs/Clustering_Leiden_resolution_1.0__18_ 1 cell 41 categories /col_attrs/Clustering_Broad_Annotation__Stringent_ 1 cell 7 categories /col_attrs/scrublet__predicted_doublets 1 cell 1 category /col_attrs/Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 cell 15 categories /col_attrs/note 1 cell 2 categories /col_attrs/tissue 1 cell 1 category /col_attrs/fly_genetics 1 cell 2 categories /col_attrs/Embedding_SCENIC_AUC_UMAP 41298 cells 2 rows /col_attrs/batch 1 cell 5 categories /col_attrs/Clustering_Leiden_resolution_0.6 1 cell 33 categories /col_attrs/batch_id 1 cell 3 categories /col_attrs/sex 1 cell 3 categories /col_attrs/n_genes 41298 cells 1 row /col_attrs/S_annotation_broad__ontology_id 1 cell 7 categories /col_attrs/S_annotation_broad_extrapolated__ontology_id 1 cell 15 categories /col_attrs/Clustering_Leiden_resolution_0.4__default__302_ 1 cell 32 categories /col_attrs/Clustering_Leiden_resolution_10.0 1 cell 133 categories /col_attrs/Clustering_Leiden_resolution_1.4 1 cell 44 categories /col_attrs/id 1 cell 5 categories /col_attrs/annotation__ontology_id 1 cell 14 categories /col_attrs/S_annotation_broad 1 cell 7 categories /col_attrs/Clustering_Leiden_resolution_8.0 1 cell 114 categories /col_attrs/S_annotation 1 cell 26 categories /col_attrs/annotation 1 cell 29 categories /col_attrs/_StableID 41298 cells 1 row /col_attrs/_Protein_Coding_Content 41298 cells 1 row /col_attrs/_Mitochondrial_Content 41298 cells 1 row /col_attrs/_Ribosomal_Content 41298 cells 1 row /col_attrs/Clustering_Broad_Annotation 1 cell 7 categories /col_attrs/CellID 41298 cells 1 row /col_attrs/_Depth 41298 cells 1 row /col_attrs/_Detected_Genes 41298 cells 1 row /col_attrs/Clustering_Leiden_resolution_0.8__14_ 1 cell 39 categories /col_attrs/Clustering_Leiden_resolution_6.0 1 cell 92 categories /col_attrs/leiden 1 cell 32 categories /col_attrs/ClusterID 1 cell 32 categories /col_attrs/Embedding_SCENIC_AUC_t_SNE 41298 cells 2 rows /col_attrs/Clustering_Leiden_resolution_1.6 1 cell 47 categories /col_attrs/S_annotation_broad_extrapolated 1 cell 15 categories /col_attrs/Clustering_Annotation__Stringent_ 1 cell 26 categories /col_attrs/Clustering_Leiden_resolution_1.2 1 cell 43 categories /col_attrs/Clustering_Leiden_resolution_4.0 1 cell 73 categories /col_attrs/Clustering_Leiden_resolution_1.8__43_ 1 cell 48 categories /col_attrs/Clustering_Annotation 1 cell 29 categories /col_attrs/scrublet__doublet_scores 1 cell 318 categories /col_attrs/Clustering_Leiden_resolution_2.0__23_ 1 cell 52 categories /col_attrs/S_annotation__ontology_id 1 cell 14 categories /col_attrs/sample_id 1 cell 5 categories
Global Metadata