[HCA] Liver Caudate Lobe ASAP7 v5
299,486 cells
H. sapiens
Pending Runs (0)
No runs available in this list.
Running Runs (0)
No runs available in this list.
Success Runs (30)
Gene Enrichment #12 - Fisher's Exact Test
Success
about 6 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
52
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #11 - Fisher's Exact Test
Success
about 6 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
52
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #10 - Fisher's Exact Test
Success
about 6 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
52
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #9 - Fisher's Exact Test
Success
about 6 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
52
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #8 - Fisher's Exact Test
Success
about 6 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
52
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #7 - Fisher's Exact Test
Success
about 6 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
52
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #6 - Fisher's Exact Test
Success
about 6 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
2761
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #5 - Fisher's Exact Test
Success
about 6 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
2761
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #4 - Fisher's Exact Test
Success
about 6 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
2761
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #3 - Fisher's Exact Test
Success
about 6 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
2761
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #2 - Fisher's Exact Test
Success
about 6 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
2761
adj_method:
fdr
min:
15
max:
500
Gene Enrichment #1 - Fisher's Exact Test
Success
about 6 years ago
input_de:
Differential expr...
fdr_cutoff:
0.05
fc_cutoff:
2
gene_set_id:
2761
adj_method:
fdr
min:
15
max:
500
Differential expression #6 - Wilcoxon [ASAP]
Success
about 6 years ago
input_matrix:
Normalization #1 ...
groups:
1 datasets
all_against_compl:
false
group_pairs:
[]
group_ref:
9
group_comp:
min_pct:
0.1
min_diff_pct:
fc_threshold:
1.3
max_cells_per_ident:
Differential expression #5 - Wilcoxon [ASAP]
Success
about 6 years ago
input_matrix:
Normalization #1 ...
groups:
1 datasets
all_against_compl:
false
group_pairs:
[]
group_ref:
6
group_comp:
min_pct:
0.1
min_diff_pct:
fc_threshold:
1.3
max_cells_per_ident:
Differential expression #4 - Wilcoxon [ASAP]
Success
about 6 years ago
input_matrix:
Normalization #1 ...
groups:
1 datasets
all_against_compl:
false
group_pairs:
[]
group_ref:
12
group_comp:
min_pct:
0.1
min_diff_pct:
fc_threshold:
1.3
max_cells_per_ident:
Differential expression #3 - Wilcoxon [Seurat]
Success
about 6 years ago
input_matrix:
Normalization #1 ...
groups:
1 datasets
all_against_compl:
false
group_pairs:
[]
group_ref:
6
group_comp:
min_pct:
0.1
min_diff_pct:
fc_threshold:
1.3
max_cells_per_ident:
Differential expression #2 - Wilcoxon [Seurat]
Success
about 6 years ago
input_matrix:
Normalization #1 ...
groups:
1 datasets
all_against_compl:
false
group_pairs:
[]
group_ref:
12
group_comp:
min_pct:
0.1
min_diff_pct:
fc_threshold:
1.3
max_cells_per_ident:
Differential expression #1 - Wilcoxon [Seurat]
Success
about 6 years ago
input_matrix:
Normalization #1 ...
groups:
1 datasets
all_against_compl:
false
group_pairs:
[]
group_ref:
9
group_comp:
min_pct:
0.1
min_diff_pct:
fc_threshold:
1.3
max_cells_per_ident:
Dimension reduction #7 - UMAP
Success
about 6 years ago
input_matrix:
Dimension reducti...
nber_dims:
3
min_dist:
0.05
n_neighbors:
30
metric:
correlation
Dimension reduction #6 - UMAP
Success
about 6 years ago
input_matrix:
Dimension reducti...
nber_dims:
2
min_dist:
0.05
n_neighbors:
30
metric:
correlation
... and 10 more
Failed/Stopped Runs (0)
No runs available in this list.
Owned by bbcf.epfl
Analyze not allowed
Blocked by
Not signed in.
Analyze permission was not granted by the project owner.
Sign in and ask the project owner for Analyze permission in project sharing settings. Another solution is to clone the project.
Annotate/Comment not allowed
Blocked by
Not signed in.
Sign in and use an account linked to ORCID. Another solution is to clone the project.
Clone/Download allowed
Granted by
Project is public.
Edit not allowed
Blocked by
Not signed in.
Editing is restricted to project owners.
Sign in and ask the owner to make the change. Editing is limited to project owners. Another solution is to clone the project.
Summary
Visualization
Analysis
Data
Sign In
Discussions
Feature requests and issues
Contact us
Rate the app
Back to Projects
Guided tours
Getting started Get project summary Visualize project Browse project data Collaborative annotation scFAIR compliant metadata Create a new project Search projectsInfo
Releases
Release notes & changelog
Project types
Available project types and their configurations
Cell ontologies
Ontology catalogs mirrored from legacy ASAP
Cell metadata schema
Cell metadata used by ASAP to annotate single-cell datasets
Cross-references
Identifier types and external database links
Atlases
FCA and HCA reference pages and entry points
File formats
Supported upload and export formats
API documentation
OpenAPI/Swagger reference for JSON endpoints
FAQ
Frequently asked questions about ASAP
Guest Mode
Feedback