[FCA] Antenna (10x, Relaxed)

Summary

Visualization

Analysis

2runs

Data

1LOOM files

Settings

Public project Shared with 0 users

Identity

oqtllw

Project Name

[FCA] Antenna (10x, Relaxed)

TypeUnknown

Origin

New project

Activity

CreatedJun 11, 2021

UpdatedApr 08, 2026

Reproducibility

Instructions List of commands

List of Loom files (JSON)

Source repository links

ArrayExpress Experiment

Identifier	Title	Other identifiers	Contributors
E-MTAB-10519	The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset		Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein

Downloaded from Fly Cell Atlas

Publications

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly

H Li et al.

Details

LOOM file	Run	Embedding	Created by	Created
Parsing	Parsing #1	Embedding_HVG_PC1_PC2	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_t_SNE	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_t_SNE	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_UMAP	bbcf.epfl	Jun 11, 2021

Metadata

Cluster/category	Label	Origin	Up-regulated genes	Down-regulated genes	Votes	Created by	Created
25	muscle cell	SCope manual	Mhc	-	+1 / -0	bbcf.epfl	May 30, 2022
24	hemocyte	SCope manual	Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
23	epithelial cell	SCope manual	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
17	adult olfactory receptor neuron Or92a	SCope manual	Or92a acj6 Orco	-	+1 / -0	bbcf.epfl	May 30, 2022
16	adult olfactory receptor neuron Or88a	SCope manual	Or88a	-	+1 / -0	bbcf.epfl	May 30, 2022
13	adult olfactory receptor neuron Or67d	SCope manual	Or67d fru	-	+1 / -0	bbcf.epfl	May 30, 2022
11	adult olfactory receptor neuron Or65	SCope manual	Or65c Or65b Or65a	-	+1 / -0	bbcf.epfl	May 30, 2022
10	adult olfactory receptor neuron Or47b	SCope manual	Or47b fru	-	+1 / -0	bbcf.epfl	May 30, 2022
5	adult olfactory receptor neuron Ir75d	SCope manual	Ir8a acj6 Ir75d	-	+1 / -0	bbcf.epfl	May 30, 2022
3	adult olfactory receptor neuron Gr21a/63a	SCope manual	Gr21a Gr63a	-	+1 / -0	bbcf.epfl	May 30, 2022
2	adult glial cell	SCope manual	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
0	Johnston organ neuron	SCope manual	nan iav nompC	-	+1 / -0	bbcf.epfl	May 30, 2022
115	adult olfactory receptor neurons, acid-sensing, Ir64a	SCope manual	Ir8a Ir64a	-	+1 / -0	bbcf.epfl	May 30, 2022
106	adult olfactory receptor neurons, unknown type, Orco+	SCope manual	acj6 Orco	-	+1 / -0	bbcf.epfl	May 30, 2022
103	adult olfactory receptor neurons, Or83c and Or82a	SCope manual	Or83c Or82a	-	+1 / -0	bbcf.epfl	May 30, 2022
94	adult olfactory receptor neurons, unknown type, Orco-	SCope manual	acj6	-	+1 / -0	bbcf.epfl	May 30, 2022
86	adult olfactory receptor neurons, Ir56a+, Orco-	SCope manual	Ir56a	-	+1 / -0	bbcf.epfl	May 30, 2022
79	adult olfactory receptor neurons, unknown types, Orco+	SCope manual	acj6 Orco	-	+1 / -0	bbcf.epfl	May 30, 2022
77	adult olfactory receptor neurons, unknown types, Orco+	SCope manual	-	-	+1 / -0	bbcf.epfl	May 30, 2022
67	arista and sacculus thermosensory and hygrosensory neurons, Ir21a, Ir40a, Gr28b	SCope manual	Ir40a Ir21a Gr28b	-	+1 / -0	bbcf.epfl	May 30, 2022
63	adult olfactory receptor neurons, unknown types, Orco+	SCope manual	-	-	+1 / -0	bbcf.epfl	May 30, 2022
61	adult olfactory receptor neuron Or47b	SCope manual	Or47b	-	+1 / -0	bbcf.epfl	May 30, 2022
58	adult olfactory receptor neuron Or88a	SCope manual	Or88a	-	+1 / -0	bbcf.epfl	May 30, 2022
55	adult olfactory receptor neurons, unknown types, Orco+	SCope manual	-	-	+1 / -0	bbcf.epfl	May 30, 2022
48	adult olfactory receptor neurons, unknown types, Orco+	SCope manual	-	-	+1 / -0	bbcf.epfl	May 30, 2022
45	adult olfactory receptor neurons, unknown types, Orco+	SCope manual	acj6 Orco	-	+1 / -0	bbcf.epfl	May 30, 2022
29	adult olfactory receptor neuron Or67d	SCope manual	Or67d fru	-	+1 / -0	bbcf.epfl	May 30, 2022
26	adult olfactory receptor neurons, Or22a, Or42b, Or59b	SCope manual	Or22b Or22a Or59b Or42b	-	+1 / -0	bbcf.epfl	May 30, 2022
15	adult olfactory receptor neurons, Or47a, Or56a and likely other ORN types	SCope manual	Or47a Or56a	-	+1 / -0	bbcf.epfl	May 30, 2022
4	adult olfactory receptor neurons, Or67a and likely other unknown ORN types	SCope manual	Orco Or67a	-	+1 / -0	bbcf.epfl	May 30, 2022
7	adult olfactory receptor neuron Or13a	SCope manual	Or13a	-	+1 / -0	bbcf.epfl	May 30, 2022
63	adult olfactory receptor neuron Or92a	SCope manual	Or92a acj6 Orco	-	+1 / -0	bbcf.epfl	May 30, 2022
21	adult antenna glial cell cluster #1	SCope manual	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
49	adult olfactory receptor neurons, acid-sensing, Ir75a/b/c, Ir64a	SCope manual	Ir75b Ir75c Ir64a Ir75a	-	+1 / -0	bbcf.epfl	May 30, 2022
42	adult olfactory receptor neuron Gr21a/63a	SCope manual	Gr21a Gr63a	-	+1 / -0	bbcf.epfl	May 30, 2022
41	adult antenna glial cell cluster #2	SCope manual	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
38	adult olfactory receptor neuron Ir75d	SCope manual	Ir8a acj6 Ir75d	-	+1 / -0	bbcf.epfl	May 30, 2022
33	adult antenna glial cell cluster #3	SCope manual	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
23	Johnston organ neuron	SCope manual	nompC	-	+1 / -0	bbcf.epfl	May 30, 2022
16	adult antenna glial cell cluster #5	SCope manual	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
20	adult olfactory receptor neurons, Ir84a, Ir31a, Ir76a, Ir76b, Ir8a, Or35a	SCope manual	Ir84a Ir31a Ir8a Or35a acj6 Ir76a Ir76b	-	+1 / -0	bbcf.epfl	May 30, 2022
15	adult antenna glial cell cluster #4	SCope manual	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
39	hemocyte	SCope manual	Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
32	adult olfactory receptor neuron Or65	SCope manual	Or65c Or65b Or65a	-	+1 / -0	bbcf.epfl	May 30, 2022
30	male germ line cells	SCope manual	S-Lap4 c-cup dj	-	+1 / -1	bbcf.epfl	May 30, 2022
29	hemocyte	SCope manual	Ppn Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
19	adult muscle system	SCope manual	Mhc	-	+1 / -0	bbcf.epfl	May 30, 2022
4	Johnston organ neuron	SCope manual	nan iav nompC	-	+1 / -0	bbcf.epfl	May 30, 2022
3	adult epidermis	SCope manual	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
0	adult epidermis	SCope manual	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
neuron	neuron	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005144	FBbt:00005144	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005124	FBbt:00005124	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
27	sacculus/arista neuron	SCope manual	Ir40a Ir21a Ir25a Gr28b	-	+1 / -0	bbcf.epfl	May 26, 2022
26	olfactory receptor neuron, coeloconics	SCope manual	Ir84a Ir31a Or35a Ir76a Ir75b Ir75c Ir64a Ir76b Ir75a	-	+1 / -0	bbcf.epfl	May 26, 2022
22	arista and sacculus thermosensory and hygrosensory neuron Ir21a, Ir40a, Gr28b	SCope manual	Ir40a Ir21a Gr28b	-	+1 / -0	bbcf.epfl	May 26, 2022
21	adult olfactory receptor neuron unknown type, Orco-	SCope manual	acj6	-	+1 / -0	bbcf.epfl	May 26, 2022
20	adult olfactory receptor neuron unknown type, Orco+	SCope manual	acj6 Orco	-	+1 / -0	bbcf.epfl	May 26, 2022
19	adult olfactory receptor neuron acid-sensing, Ir75a/b/c, Ir64a	SCope manual	Ir75b Ir75c Ir64a Ir75a	-	+1 / -0	bbcf.epfl	May 26, 2022
18	adult olfactory receptor neuron acid-sensing, Ir64a	SCope manual	Ir8a Ir64a	-	+1 / -0	bbcf.epfl	May 26, 2022
15	adult olfactory receptor neuron Or85a, Or43b	SCope manual	Or85a Or43b	-	+1 / -0	bbcf.epfl	May 26, 2022
14	adult olfactory receptor neuron Or83c and Or82a	SCope manual	Or83c Or82a	-	+1 / -0	bbcf.epfl	May 26, 2022
12	adult olfactory receptor neuron Or67a and likely other unknown ORN types	SCope manual	Orco Or67a	-	+1 / -0	bbcf.epfl	May 26, 2022
9	adult olfactory receptor neuron Or47a, Or56a and likely other ORN types	SCope manual	Or47a Or56a	-	+1 / -0	bbcf.epfl	May 26, 2022
8	adult olfactory receptor neuron Or22a, Or42b, Or59b	SCope manual	Or22b Or22a Or59b Or42b	-	+1 / -0	bbcf.epfl	May 26, 2022
6	adult olfactory receptor neuron Ir84a, Ir31a, Ir76a, Ir76b, Ir8a, Or35a	SCope manual	Ir84a Ir31a Ir8a Or35a acj6 Ir76a Ir76b	-	+1 / -0	bbcf.epfl	May 26, 2022
4	adult olfactory receptor neuron Ir56a+, Orco-	SCope manual	Ir56a	-	+1 / -0	bbcf.epfl	May 26, 2022
adult glial cell	adult glial cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
1	adult antenna glial cell	SCope manual	repo	-	+1 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
tracheolar cell	tracheolar cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
sensory neuron	sensory neuron	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
oenocyte	oenocyte	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male reproductive system	male reproductive system	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male germline cell	male germline cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
glial cell	glial cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
gland	gland	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female reproductive system	female reproductive system	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female germline cell	female germline cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
fat cell	fat cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
epithelial cell	epithelial cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
sacculus/arista neuron	sacculus/arista neuron	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
olfactory receptor neuron, coeloconics	olfactory receptor neuron, coeloconics	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
arista and sacculus thermosensory and hygrosensory neuron Ir21a, Ir40a, Gr28b	arista and sacculus thermosensory and hygrosensory neuron Ir21a, Ir40a, Gr28b	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron unknown type, Orco-	adult olfactory receptor neuron unknown type, Orco-	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron acid-sensing, Ir75a/b/c, Ir64a	adult olfactory receptor neuron acid-sensing, Ir75a/b/c, Ir64a	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron acid-sensing, Ir64a	adult olfactory receptor neuron acid-sensing, Ir64a	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or92a	adult olfactory receptor neuron Or92a	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or88a	adult olfactory receptor neuron Or88a	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or85a, Or43b	adult olfactory receptor neuron Or85a, Or43b	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or67d	adult olfactory receptor neuron Or67d	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or67a and likely other unknown ORN types	adult olfactory receptor neuron Or67a and likely other unknown ORN types	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or65	adult olfactory receptor neuron Or65	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or47b	adult olfactory receptor neuron Or47b	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or47a, Or56a and likely other ORN types	adult olfactory receptor neuron Or47a, Or56a and likely other ORN types	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or22a, Or42b, Or59b	adult olfactory receptor neuron Or22a, Or42b, Or59b	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or13a	adult olfactory receptor neuron Or13a	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Ir84a, Ir31a, Ir76a, Ir76b, Ir8a, Or35a	adult olfactory receptor neuron Ir84a, Ir31a, Ir76a, Ir76b, Ir8a, Or35a	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Ir75d	adult olfactory receptor neuron Ir75d	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Ir56a+, Orco-	adult olfactory receptor neuron Ir56a+, Orco-	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Gr21a/63a	adult olfactory receptor neuron Gr21a/63a	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult antenna glial cell	adult antenna glial cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Johnston organ neuron	Johnston organ neuron	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00100000	FBbt:00100000	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067064	FBbt:00067064	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067059	FBbt:00067059	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067057	FBbt:00067057	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067056	FBbt:00067056	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067031	FBbt:00067031	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067016	FBbt:00067016	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067011	FBbt:00067011	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00047054	FBbt:00047054	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005063	FBbt:00005063	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00000124	FBbt:00000124	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
sensory neuron	sensory neuron	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
glial cell	glial cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
epithelial cell	epithelial cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
84	adult olfactory receptor neurons, Or85a, Or43b	SCope manual	Or85a Or43b	-	+1 / -0	bbcf.epfl	May 26, 2022

Go back to project's annotations

Includes annotations from every project you can read that shares this cell set.

Source project	Metadata name	Cluster/category	Label	Origin	Cell set	Up-regulated genes	Down-regulated genes	Votes	Created by	Created

[FCA] Antenna (10x, Relaxed) ASAP26 v5

Summary

ArrayExpress Experiment

LOOM/H5AD

Details