[{"name":"cell_filtering/11070/output.loom","file_size":"67.7MB","run_name":"Cell filtering #1","run_attrs":"\u003cdiv class='flex flex-wrap gap-1.5 items-center'\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='depth: Minimum depth'\u003e\u003cspan class='font-semibold text-gray-800'\u003edepth:\u003c/span\u003e\u003cspan class='text-gray-600'\u003e1000\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='detected_genes: Minimum number of detected genes'\u003e\u003cspan class='font-semibold text-gray-800'\u003edetected_genes:\u003c/span\u003e\u003cspan class='text-gray-600'\u003e1000\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='mito_content: Minimum percentage of mitochondrial genes'\u003e\u003cspan class='font-semibold text-gray-800'\u003emito_content:\u003c/span\u003e\u003cspan class='text-gray-600'\u003e40\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='protein_coding_content: Minimum percentage of protein-coding genes'\u003e\u003cspan class='font-semibold text-gray-800'\u003eprotein_coding_content:\u003c/span\u003e\u003cspan class='text-gray-600'\u003e40\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='ribo_content: Minimum percentage of ribosomal genes'\u003e\u003cspan class='font-semibold text-gray-800'\u003eribo_content:\u003c/span\u003e\u003cspan class='text-gray-600'\u003e0\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='manually_discarded_cols: Manually discarded cells'\u003e\u003cspan class='font-semibold text-gray-800'\u003emanually_discarded_cols:\u003c/span\u003e\u003cspan class='text-gray-600'\u003e965e724ec0956583bdd72685130bac36a900d9171195579fe233253a3ce1575f\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='nber_manually_discarded_cols: Number of manually discarded cells'\u003e\u003cspan class='font-semibold text-gray-800'\u003enber_manually_discarded_cols:\u003c/span\u003e\u003cspan class='text-gray-600'\u003e0\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='discarded_cols: Discarded cells'\u003e\u003cspan class='font-semibold text-gray-800'\u003ediscarded_cols:\u003c/span\u003e\u003cspan class='text-gray-600'\u003e867b58647f2552e07d8b6a141c5783a9e69ea85120a34c2e3703c3b52af8214b\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium border bg-blue-100 text-blue-700 border-blue-200 cursor-pointer' title='input_matrix' data-controller='pipeline-runs' data-pipeline-runs-run-id-value='11065' data-pipeline-runs-url-value='/projects/amc3um/pipeline_runs' data-action='click-\u003epipeline-runs#showPipeline' onclick='event.stopPropagation();'\u003e\u003cspan class='font-semibold text-blue-800'\u003einput_matrix:\u003c/span\u003e\u003cspan class='text-blue-600'\u003ematrix\u003c/span\u003e\u003c/span\u003e\u003c/div\u003e","nber_cols":2341,"nber_rows":58347,"url":"https://asap.epfl.ch/projects/amc3um/get_file?filename=cell_filtering%2F11070%2Foutput.loom","url_h5ad":"https://asap.epfl.ch/projects/amc3um/get_file?filename=cell_filtering%2F11070%2Foutput.h5ad","content":[{"name":"/col_attrs/analysis_protocol.protocol_core.protocol_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/analysis_protocol.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/analysis_working_group_approval_status","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/barcode","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/bundle_uuid","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/bundle_version","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/CellID","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":false},{"name":"/col_attrs/cell_suspension.genus_species.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/cell_suspension.genus_species.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/cell_suspension.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/_Depth","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/derived_organ_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/derived_organ_ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/derived_organ_parts_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/derived_organ_parts_ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_Detected_Genes","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/donor_organism.development_stage.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.development_stage.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.diseases.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.diseases.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.human_specific.ethnicity.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.human_specific.ethnicity.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.is_living","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.sex","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/dss_bundle_fqid","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/emptydrops_is_cell","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/file_uuid","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/file_version","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/genes_detected","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":true},{"name":"/col_attrs/library_preparation_protocol.end_bias","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.input_nucleic_acid_molecule.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.input_nucleic_acid_molecule.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.library_construction_method.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.library_construction_method.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.strand","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_Mitochondrial_Content","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/project.project_core.project_short_name","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/project.project_core.project_title","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/project.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_Protein_Coding_Content","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/_Ribosomal_Content","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/specimen_from_organism.organ.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.organ.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.organ_parts.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.organ_parts.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_StableID","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/total_umis","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/matrix","nber_cols":2341,"nber_rows":58347,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/Accession","nber_cols":1,"nber_rows":58347,"data_type":"STRING","imported":false},{"name":"/row_attrs/_Biotypes","nber_cols":1,"nber_rows":58347,"data_type":"DISCRETE","imported":false},{"name":"/row_attrs/chromosome","nber_cols":1,"nber_rows":58347,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/_Chromosomes","nber_cols":1,"nber_rows":58347,"data_type":"DISCRETE","imported":false},{"name":"/row_attrs/featureend","nber_cols":1,"nber_rows":58347,"data_type":"NUMERIC","imported":true},{"name":"/row_attrs/featurekey","nber_cols":1,"nber_rows":58347,"data_type":"STRING","imported":true},{"name":"/row_attrs/featurestart","nber_cols":1,"nber_rows":58347,"data_type":"NUMERIC","imported":true},{"name":"/row_attrs/featuretype","nber_cols":1,"nber_rows":58347,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/Gene","nber_cols":1,"nber_rows":58347,"data_type":"STRING","imported":false},{"name":"/row_attrs/genus_species","nber_cols":1,"nber_rows":58347,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/isgene","nber_cols":1,"nber_rows":58347,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/_StableID","nber_cols":1,"nber_rows":58347,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_Sum","nber_cols":1,"nber_rows":58347,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_SumExonLength","nber_cols":1,"nber_rows":58347,"data_type":"NUMERIC","imported":false}]},{"name":"gene_filtering/11071/output.loom","file_size":"47.0MB","run_name":"Normalization #2","run_attrs":"\u003cdiv class='flex flex-wrap gap-1.5 items-center'\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium border bg-blue-100 text-blue-700 border-blue-200 cursor-pointer' title='input_matrix' data-controller='pipeline-runs' data-pipeline-runs-run-id-value='11071' data-pipeline-runs-url-value='/projects/amc3um/pipeline_runs' data-action='click-\u003epipeline-runs#showPipeline' onclick='event.stopPropagation();'\u003e\u003cspan class='font-semibold text-blue-800'\u003einput_matrix:\u003c/span\u003e\u003cspan class='text-blue-600'\u003ematrix\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='scale_factor: Sets the scale factor for cell-level normalization [DEFAULT=10000]'\u003e\u003cspan class='font-semibold text-gray-800'\u003escale_factor:\u003c/span\u003e\u003cspan class='text-gray-600'\u003e10000\u003c/span\u003e\u003c/span\u003e\u003c/div\u003e","nber_cols":2341,"nber_rows":11615,"url":"https://asap.epfl.ch/projects/amc3um/get_file?filename=gene_filtering%2F11071%2Foutput.loom","url_h5ad":"https://asap.epfl.ch/projects/amc3um/get_file?filename=gene_filtering%2F11071%2Foutput.h5ad","content":[{"name":"/col_attrs/analysis_protocol.protocol_core.protocol_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/analysis_protocol.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/analysis_working_group_approval_status","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/barcode","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/bundle_uuid","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/bundle_version","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/CellID","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":false},{"name":"/col_attrs/cell_suspension.genus_species.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/cell_suspension.genus_species.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/cell_suspension.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/_clust_1_seurat","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":false},{"name":"/col_attrs/_Depth","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/derived_organ_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/derived_organ_ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/derived_organ_parts_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/derived_organ_parts_ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_Detected_Genes","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/donor_organism.development_stage.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.development_stage.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.diseases.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.diseases.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.human_specific.ethnicity.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.human_specific.ethnicity.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.is_living","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.sex","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_dr_2_inc_pca_50D","nber_cols":2341,"nber_rows":50,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/_dr_3_umap_2D","nber_cols":2341,"nber_rows":2,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/_dr_5_umap_3D","nber_cols":2341,"nber_rows":3,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/dss_bundle_fqid","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/emptydrops_is_cell","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/file_uuid","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/file_version","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/genes_detected","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":true},{"name":"/col_attrs/library_preparation_protocol.end_bias","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.input_nucleic_acid_molecule.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.input_nucleic_acid_molecule.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.library_construction_method.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.library_construction_method.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.strand","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_Mitochondrial_Content","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/project.project_core.project_short_name","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/project.project_core.project_title","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/project.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_Protein_Coding_Content","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/_Ribosomal_Content","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/specimen_from_organism.organ.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.organ.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.organ_parts.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.organ_parts.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_StableID","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/total_umis","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/layers/norm_2_asap_seurat","nber_cols":2341,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/layers/scaling_1_asap_seurat","nber_cols":2341,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/matrix","nber_cols":2341,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/Accession","nber_cols":1,"nber_rows":11615,"data_type":"STRING","imported":false},{"name":"/row_attrs/_Biotypes","nber_cols":1,"nber_rows":11615,"data_type":"DISCRETE","imported":false},{"name":"/row_attrs/chromosome","nber_cols":1,"nber_rows":11615,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/_Chromosomes","nber_cols":1,"nber_rows":11615,"data_type":"DISCRETE","imported":false},{"name":"/row_attrs/_de_10_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_11_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_12_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_13_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_14_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_15_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_16_wilcox-seurat","nber_cols":null,"nber_rows":null,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_17_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_18_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_1_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_2_wilcox-seurat","nber_cols":null,"nber_rows":null,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_3_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_4_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_5_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_6_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_7_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_8_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_de_9_wilcox-seurat","nber_cols":5,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/featureend","nber_cols":1,"nber_rows":11615,"data_type":"NUMERIC","imported":true},{"name":"/row_attrs/featurekey","nber_cols":1,"nber_rows":11615,"data_type":"STRING","imported":true},{"name":"/row_attrs/featurestart","nber_cols":1,"nber_rows":11615,"data_type":"NUMERIC","imported":true},{"name":"/row_attrs/featuretype","nber_cols":1,"nber_rows":11615,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/Gene","nber_cols":1,"nber_rows":11615,"data_type":"STRING","imported":false},{"name":"/row_attrs/genus_species","nber_cols":1,"nber_rows":11615,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/isgene","nber_cols":1,"nber_rows":11615,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/_StableID","nber_cols":1,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_Sum","nber_cols":1,"nber_rows":11615,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_SumExonLength","nber_cols":1,"nber_rows":11615,"data_type":"NUMERIC","imported":false}]},{"name":"gene_filtering/11072/output.loom","file_size":"30.4MB","run_name":"Normalization #1","run_attrs":"\u003cdiv class='flex flex-wrap gap-1.5 items-center'\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium border bg-blue-100 text-blue-700 border-blue-200 cursor-pointer' title='input_matrix' data-controller='pipeline-runs' data-pipeline-runs-run-id-value='11072' data-pipeline-runs-url-value='/projects/amc3um/pipeline_runs' data-action='click-\u003epipeline-runs#showPipeline' onclick='event.stopPropagation();'\u003e\u003cspan class='font-semibold text-blue-800'\u003einput_matrix:\u003c/span\u003e\u003cspan class='text-blue-600'\u003ematrix\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='scale_factor: Sets the scale factor for cell-level normalization [DEFAULT=10000]'\u003e\u003cspan class='font-semibold text-gray-800'\u003escale_factor:\u003c/span\u003e\u003cspan class='text-gray-600'\u003e10000\u003c/span\u003e\u003c/span\u003e\u003c/div\u003e","nber_cols":2341,"nber_rows":3304,"url":"https://asap.epfl.ch/projects/amc3um/get_file?filename=gene_filtering%2F11072%2Foutput.loom","url_h5ad":"https://asap.epfl.ch/projects/amc3um/get_file?filename=gene_filtering%2F11072%2Foutput.h5ad","content":[{"name":"/col_attrs/analysis_protocol.protocol_core.protocol_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/analysis_protocol.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/analysis_working_group_approval_status","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/barcode","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/bundle_uuid","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/bundle_version","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/CellID","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":false},{"name":"/col_attrs/cell_suspension.genus_species.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/cell_suspension.genus_species.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/cell_suspension.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/_clust_2_seurat","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":false},{"name":"/col_attrs/_Depth","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/derived_organ_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/derived_organ_ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/derived_organ_parts_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/derived_organ_parts_ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_Detected_Genes","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/donor_organism.development_stage.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.development_stage.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.diseases.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.diseases.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.human_specific.ethnicity.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.human_specific.ethnicity.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.is_living","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.sex","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_dr_1_inc_pca_50D","nber_cols":2341,"nber_rows":50,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/_dr_4_umap_2D","nber_cols":2341,"nber_rows":2,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/_dr_6_umap_3D","nber_cols":2341,"nber_rows":3,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/dss_bundle_fqid","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/emptydrops_is_cell","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/file_uuid","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/file_version","nber_cols":2341,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/genes_detected","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":true},{"name":"/col_attrs/library_preparation_protocol.end_bias","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.input_nucleic_acid_molecule.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.input_nucleic_acid_molecule.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.library_construction_method.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.library_construction_method.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.strand","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_Mitochondrial_Content","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/project.project_core.project_short_name","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/project.project_core.project_title","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/project.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_Protein_Coding_Content","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/_Ribosomal_Content","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/specimen_from_organism.organ.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.organ.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.organ_parts.ontology","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.organ_parts.ontology_label","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.provenance.document_id","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_StableID","nber_cols":2341,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/total_umis","nber_cols":2341,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/layers/norm_1_asap_seurat","nber_cols":2341,"nber_rows":3304,"data_type":"NUMERIC","imported":false},{"name":"/layers/scaling_2_asap_seurat","nber_cols":2341,"nber_rows":3304,"data_type":"NUMERIC","imported":false},{"name":"/matrix","nber_cols":2341,"nber_rows":3304,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/Accession","nber_cols":1,"nber_rows":3304,"data_type":"STRING","imported":false},{"name":"/row_attrs/_Biotypes","nber_cols":1,"nber_rows":3304,"data_type":"DISCRETE","imported":false},{"name":"/row_attrs/chromosome","nber_cols":1,"nber_rows":3304,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/_Chromosomes","nber_cols":1,"nber_rows":3304,"data_type":"DISCRETE","imported":false},{"name":"/row_attrs/featureend","nber_cols":1,"nber_rows":3304,"data_type":"NUMERIC","imported":true},{"name":"/row_attrs/featurekey","nber_cols":1,"nber_rows":3304,"data_type":"STRING","imported":true},{"name":"/row_attrs/featurestart","nber_cols":1,"nber_rows":3304,"data_type":"NUMERIC","imported":true},{"name":"/row_attrs/featuretype","nber_cols":1,"nber_rows":3304,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/Gene","nber_cols":1,"nber_rows":3304,"data_type":"STRING","imported":false},{"name":"/row_attrs/genus_species","nber_cols":1,"nber_rows":3304,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/isgene","nber_cols":1,"nber_rows":3304,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/_StableID","nber_cols":1,"nber_rows":3304,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_Sum","nber_cols":1,"nber_rows":3304,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_SumExonLength","nber_cols":1,"nber_rows":3304,"data_type":"NUMERIC","imported":false}]},{"name":"parsing/output.loom","file_size":"87.2MB","run_name":"Parsing #1","run_attrs":"\u003cdiv class='flex flex-wrap gap-1.5 items-center'\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='file_type'\u003e\u003cspan class='font-semibold text-gray-800'\u003efile_type:\u003c/span\u003e\u003cspan class='text-gray-600'\u003eLOOM\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='nber_cols'\u003e\u003cspan class='font-semibold text-gray-800'\u003enber_cols:\u003c/span\u003e\u003cspan class='text-gray-600'\u003e0\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='nber_rows'\u003e\u003cspan class='font-semibold text-gray-800'\u003enber_rows:\u003c/span\u003e\u003cspan class='text-gray-600'\u003e0\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='sel_hca_projects'\u003e\u003cspan class='font-semibold text-gray-800'\u003esel_hca_projects:\u003c/span\u003e\u003cspan class='text-gray-600'\u003e{}\u003c/span\u003e\u003c/span\u003e\u003cspan class='inline-flex items-center px-2 py-0.5 rounded text-xs font-medium bg-gray-100 text-gray-700 border border-gray-200 cursor-help' title='hca_project_id'\u003e\u003cspan class='font-semibold text-gray-800'\u003ehca_project_id:\u003c/span\u003e\u003cspan class='text-gray-600'\u003ecddab57b-6868-4be4-806f-395ed9dd635a\u003c/span\u003e\u003c/span\u003e\u003c/div\u003e","nber_cols":2544,"nber_rows":58347,"url":"https://asap.epfl.ch/projects/amc3um/get_file?filename=parsing%2Foutput.loom","url_h5ad":"https://asap.epfl.ch/projects/amc3um/get_file?filename=parsing%2Foutput.h5ad","content":[{"name":"/col_attrs/analysis_protocol.protocol_core.protocol_id","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/analysis_protocol.provenance.document_id","nber_cols":2544,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/analysis_working_group_approval_status","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/barcode","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/bundle_uuid","nber_cols":2544,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/bundle_version","nber_cols":2544,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/CellID","nber_cols":2544,"nber_rows":1,"data_type":"STRING","imported":false},{"name":"/col_attrs/cell_suspension.genus_species.ontology","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/cell_suspension.genus_species.ontology_label","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/cell_suspension.provenance.document_id","nber_cols":2544,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/_Depth","nber_cols":2544,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/derived_organ_label","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/derived_organ_ontology","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/derived_organ_parts_label","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/derived_organ_parts_ontology","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_Detected_Genes","nber_cols":2544,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/donor_organism.development_stage.ontology","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.development_stage.ontology_label","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.diseases.ontology","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.diseases.ontology_label","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.human_specific.ethnicity.ontology","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.human_specific.ethnicity.ontology_label","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.is_living","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.provenance.document_id","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/donor_organism.sex","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/dss_bundle_fqid","nber_cols":2544,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/emptydrops_is_cell","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/file_uuid","nber_cols":2544,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/file_version","nber_cols":2544,"nber_rows":1,"data_type":"STRING","imported":true},{"name":"/col_attrs/genes_detected","nber_cols":2544,"nber_rows":1,"data_type":"NUMERIC","imported":true},{"name":"/col_attrs/library_preparation_protocol.end_bias","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.input_nucleic_acid_molecule.ontology","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.input_nucleic_acid_molecule.ontology_label","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.library_construction_method.ontology","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.library_construction_method.ontology_label","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.provenance.document_id","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/library_preparation_protocol.strand","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_Mitochondrial_Content","nber_cols":2544,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/project.project_core.project_short_name","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/project.project_core.project_title","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/project.provenance.document_id","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_Protein_Coding_Content","nber_cols":2544,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/_Ribosomal_Content","nber_cols":2544,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/specimen_from_organism.organ.ontology","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.organ.ontology_label","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.organ_parts.ontology","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.organ_parts.ontology_label","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/specimen_from_organism.provenance.document_id","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/col_attrs/_StableID","nber_cols":2544,"nber_rows":1,"data_type":"NUMERIC","imported":false},{"name":"/col_attrs/total_umis","nber_cols":2544,"nber_rows":1,"data_type":"DISCRETE","imported":true},{"name":"/matrix","nber_cols":2544,"nber_rows":58347,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/Accession","nber_cols":1,"nber_rows":58347,"data_type":"STRING","imported":false},{"name":"/row_attrs/_Biotypes","nber_cols":1,"nber_rows":58347,"data_type":"DISCRETE","imported":false},{"name":"/row_attrs/chromosome","nber_cols":1,"nber_rows":58347,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/_Chromosomes","nber_cols":1,"nber_rows":58347,"data_type":"DISCRETE","imported":false},{"name":"/row_attrs/featureend","nber_cols":1,"nber_rows":58347,"data_type":"NUMERIC","imported":true},{"name":"/row_attrs/featurekey","nber_cols":1,"nber_rows":58347,"data_type":"STRING","imported":true},{"name":"/row_attrs/featurestart","nber_cols":1,"nber_rows":58347,"data_type":"NUMERIC","imported":true},{"name":"/row_attrs/featuretype","nber_cols":1,"nber_rows":58347,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/Gene","nber_cols":1,"nber_rows":58347,"data_type":"STRING","imported":false},{"name":"/row_attrs/genus_species","nber_cols":1,"nber_rows":58347,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/isgene","nber_cols":1,"nber_rows":58347,"data_type":"DISCRETE","imported":true},{"name":"/row_attrs/_StableID","nber_cols":1,"nber_rows":58347,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_Sum","nber_cols":1,"nber_rows":58347,"data_type":"NUMERIC","imported":false},{"name":"/row_attrs/_SumExonLength","nber_cols":1,"nber_rows":58347,"data_type":"NUMERIC","imported":false}]}]