[FCA] Heart (10x, Relaxed)

Summary

Visualization

Analysis

2runs

Data

1LOOM files

Settings

Public project Shared with 0 users

Identity

a6jvxj

Project Name

[FCA] Heart (10x, Relaxed)

TypeUnknown

Origin

New project

Activity

CreatedJun 11, 2021

UpdatedApr 09, 2026

Reproducibility

Instructions List of commands

List of Loom files (JSON)

Source repository links

ArrayExpress Experiment

Identifier	Title	Other identifiers	Contributors
E-MTAB-10519	The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset		Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein

Downloaded from Fly Cell Atlas

Publications

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly

H Li et al.

Details

LOOM file	Run	Embedding	Created by	Created
Parsing	Parsing #1	Embedding_HVG_PC1_PC2	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_t_SNE	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_t_SNE	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_UMAP	bbcf.epfl	Jun 11, 2021

Metadata

Cluster/category	Label	Origin	Up-regulated genes	Down-regulated genes	Votes	Created by	Created
14	muscle cell	SCope manual	Mlp84B Act57B bt sls	-	+1 / -0	bbcf.epfl	May 30, 2022
11	epithelial cell	SCope manual	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
10	crystal cell	SCope manual	lz PPO1 PPO2	-	+1 / -0	bbcf.epfl	May 30, 2022
8	adult tracheocyte	SCope manual	trh	-	+1 / -0	bbcf.epfl	May 30, 2022
5	adult ostium	SCope manual	Doc1 wg Doc3	-	+1 / -0	bbcf.epfl	May 30, 2022
3	adult heart ventral longitudinal muscle	SCope manual	bt wupA org-1 sls	-	+2 / -0	bbcf.epfl	May 30, 2022
2	adult fat body	SCope manual	AkhR Lsp1alpha Lsp1beta apolpp Fbp1 Fbp2 Lst	-	+1 / -0	bbcf.epfl	May 30, 2022
1	adult abdominal pericardial cell	SCope manual	sns Amnionless zfh1 pros Hand	-	+2 / -0	bbcf.epfl	May 30, 2022
7	adult salivary gland	SCope manual	EAChm sens LysP	-	+1 / -0	bbcf.epfl	May 30, 2022
48	adult heart ventral longitudinal muscle	SCope manual	bt wupA org-1 sls	-	+1 / -0	bbcf.epfl	May 30, 2022
7	adult heart ventral longitudinal muscle	SCope manual	-	-	+1 / -0	bbcf.epfl	May 30, 2022
25	adult ostium	SCope manual	Doc1 wg Doc3	-	+1 / -0	bbcf.epfl	May 30, 2022
13	indirect flight muscle	SCope manual	fln TpnC4	-	+1 / -0	bbcf.epfl	May 30, 2022
23	adult fat body	SCope manual	Lsp1alpha Lsp1beta Fbp1 Fbp2	-	+1 / -0	bbcf.epfl	May 30, 2022
17	adult trachea	SCope manual	trh	-	+1 / -0	bbcf.epfl	May 30, 2022
13	adult abdominal pericardial cell	SCope manual	sns Amnionless zfh1 Hand	-	+1 / -0	bbcf.epfl	May 30, 2022
12	adult heart ventral longitudinal muscle	SCope manual	bt wupA org-1 sls	-	+2 / -0	bbcf.epfl	May 30, 2022
12	dorsal diaphragm	SCope manual	Mhc org-1 sls	-	+1 / -1	bbcf.epfl	May 30, 2022
9	cardiomyocyte, working adult heart muscle (non-ostia)	SCope manual	tin lbl	-	+1 / -0	bbcf.epfl	May 30, 2022
3	adult fat body	SCope manual	AkhR apolpp Lst	-	+1 / -0	bbcf.epfl	May 30, 2022
12	hemocyte	SCope manual	Ppn Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
4	adult oenocyte	SCope manual	FASN2 salm	-	+1 / -0	bbcf.epfl	May 30, 2022
19	adult muscle system	SCope manual	Mlp84B Act57B bt sls	-	+1 / -0	bbcf.epfl	May 30, 2022
1	adult abdominal pericardial cell	SCope manual	sns pros	-	+1 / -0	bbcf.epfl	May 30, 2022
22	indirect flight muscle	SCope manual	vg fln	-	+1 / -0	bbcf.epfl	May 30, 2022
2	epithelial cell	SCope manual	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
0	epithelial cell	SCope manual	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
14	crystal cell	SCope manual	lz PPO1 PPO2	-	+1 / -0	bbcf.epfl	May 30, 2022
0	adult Malpighian tubule	SCope manual	Muc11A mesh Scp2	-	+1 / -0	bbcf.epfl	May 30, 2022
10	adult trachea	SCope manual	ect trh	-	+1 / -0	bbcf.epfl	May 30, 2022
8	adult peripheral neuron of the heart	SCope manual	nSyb Syt1	-	+2 / -0	bbcf.epfl	May 30, 2022
adult heart ventral longitudinal muscle	adult heart ventral longitudinal muscle	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
indirect flight muscle	indirect flight muscle	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
crystal cell	crystal cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
cardiomyocyte, working adult heart muscle (non-ostia)	cardiomyocyte, working adult heart muscle (non-ostia)	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult tracheal cell	adult tracheal cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult peripheral neuron of the heart	adult peripheral neuron of the heart	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult heart ventral longitudinal muscle	adult heart ventral longitudinal muscle	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
tracheolar cell	tracheolar cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
oenocyte	oenocyte	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
gland	gland	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
fat cell	fat cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
excretory system	excretory system	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
cardial cell	cardial cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00013185	FBbt:00013185	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005063	FBbt:00005063	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005040	FBbt:00005040	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003550	FBbt:00003550	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003135	FBbt:00003135	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00000124	FBbt:00000124	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00013185	FBbt:00013185	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005725	FBbt:00005725	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005063	FBbt:00005063	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005040	FBbt:00005040	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003550	FBbt:00003550	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003361	FBbt:00003361	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003209	FBbt:00003209	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003185	FBbt:00003185	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003161	FBbt:00003161	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003135	FBbt:00003135	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00001690	FBbt:00001690	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00000124	FBbt:00000124	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
tracheolar cell	tracheolar cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
somatic precursor cell	somatic precursor cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
sensory neuron	sensory neuron	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
oenocyte	oenocyte	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male germline cell	male germline cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
glial cell	glial cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
gland	gland	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female reproductive system	female reproductive system	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female germline cell	female germline cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
fat cell	fat cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
excretory system	excretory system	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
epithelial cell	epithelial cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
cardial cell	cardial cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
tracheolar cell	tracheolar cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
gland	gland	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
fat cell	fat cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
excretory system	excretory system	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
epithelial cell	epithelial cell	ASAP auto	-	-	+0 / -0	bbcf.epfl	May 26, 2022
9	cardiomyocyte, working adult heart muscle (non-ostia)	SCope manual	tin lbl	-	+1 / -0	bbcf.epfl	May 26, 2022
6	adult peripheral neuron of the heart	SCope manual	nSyb Syt1	-	+2 / -0	bbcf.epfl	May 26, 2022

Go back to project's annotations

Includes annotations from every project you can read that shares this cell set.

Source project	Metadata name	Cluster/category	Label	Origin	Cell set	Up-regulated genes	Down-regulated genes	Votes	Created by	Created

[FCA] Heart (10x, Relaxed) ASAP32 v5

Summary

ArrayExpress Experiment

LOOM/H5AD

Details