[HCA] Brain Neural Cells ASAP8 v5

156'936 cells H. sapiens

Gene filtering #1 (hvg_scanpy) - Expression Matrix - scaling_1_asap_seurat ASAP pipeline numeric matrix

General Information

Dimensions
3765 genes 153201 cells
Data Type
NUMERIC
Storage type
numeric matrix
Loom File Path

gene_filtering/15298/output.loom

Path in Loom File

/layers/scaling_1_asap_seurat

Data origin
ASAP pipeline

Registered from an analysis run in this project.

Produced by Analysis

Scaling #1

Size

2.15GB

Preview

Sample: 10 gene × up to 10 cell (showing first 10 rows)

Gene \ Cell Cell 1 Cell 2 Cell 3 Cell 4 Cell 5 Cell 6 Cell 7 Cell 8 Cell 9 Cell 10
Gene 1 -0.21 -0.21 -0.21 -0.21 -0.21 -0.21 -0.21 -0.21 -0.21 -0.21
Gene 2 -0.28 -0.28 -0.28 -0.28 -0.28 -0.28 -0.28 2.85 -0.28 -0.28
Gene 3 -0.11 -0.11 -0.11 -0.11 -0.11 -0.11 -0.11 -0.11 -0.11 -0.11
Gene 4 -0.31 -0.31 -0.31 -0.31 2.08 -0.31 -0.31 -0.31 -0.31 -0.31
Gene 5 -0.26 -0.26 -0.26 -0.26 -0.26 -0.26 -0.26 3.55 2.56 -0.26
Gene 6 -0.28 -0.28 -0.28 -0.28 2.48 -0.28 -0.28 -0.28 2.25 -0.28
Gene 7 -0.19 -0.19 -0.19 -0.19 -0.19 -0.19 -0.19 -0.19 -0.19 -0.19
Gene 8 -0.33 -0.33 -0.33 -0.33 1.31 -0.33 -0.33 -0.33 -0.33 -0.33
Gene 9 -0.30 -0.30 -0.30 -0.30 1.69 -0.30 -0.30 -0.30 -0.30 -0.30
Gene 10 -0.30 -0.30 -0.30 -0.30 1.64 -0.30 -0.30 -0.30 -0.30 -0.30

Distribution

Distribution of total counts by gene
Distribution of total counts by cell