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Kalnytska et al 2023 ASAP93 v6

9'111 cells M. musculus

Import metadata #2 (add_meta) - Expression Matrix - rmcov_1_limma ASAP pipeline numeric matrix

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General Information

Dimensions
22106 genes 8846 cells
Data Type
NUMERIC
Storage type
numeric matrix
Loom File Path

gene_filtering/376148/output.loom

Path in Loom File

/layers/rmcov_1_limma

Data origin
ASAP pipeline

Registered from an analysis run in this project.

Produced by Analysis

Removing covariates #1

Size

1.46GB

Preview

Sample: 10 gene × up to 10 cell (showing first 10 rows)

Gene \ Cell Cell 1 Cell 2 Cell 3 Cell 4 Cell 5 Cell 6 Cell 7 Cell 8 Cell 9 Cell 10
Gene 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
Gene 2 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
Gene 3 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
Gene 4 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
Gene 5 -0.01 -0.01 -0.01 -0.01 -0.01 0.42 -0.01 -0.01 0.30 0.01
Gene 6 0.86 1.01 0.86 1.06 0.67 0.41 1.67 1.19 0.77 0.92
Gene 7 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
Gene 8 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
Gene 9 0.01 0.01 0.01 0.01 0.01 -0.01 0.01 0.52 0.01 -0.01
Gene 10 0.00 0.00 0.48 0.00 0.37 0.42 0.44 0.00 0.00 0.38

Distribution

Distribution of total counts by gene
Distribution of total counts by cell